Structure

De acordo com a página do Structure, “The program structure is a free software package for using multi-locus genotype data to investigate population structure. Its uses include inferring the presence of distinct populations, assigning individuals to populations, studying hybrid zones, identifying migrants and admixed individuals, and estimating population allele frequencies in situations where many individuals are migrants or admixed. It can be applied to most of the commonly-used genetic markers, including SNPS, microsatellites, RFLPs and AFLPs”.

Versões Disponíveis

structure/2.3.4

Submissão de Jobs Seriais

Crie um arquivo chamado, por exemplo, submit_serial_jobs.sh:

#!/bin/bash
#SBATCH -t 24:00:00

export INPUT="input"
export OUTPUT="*"

module load structure
job-nanny ./structure -K 5 -o output5

Para submeter o processo, basta usar o comando:

sbatch submit_serial_jobs.sh

Referências

Para informações adicionais sobre o software, consulte a página do Structure.