MrBayes » History » Version 2
Gabriel Winckler, 11 Aug 2015 13:45
| 1 | 2 | Gabriel Winckler | h1. MrBayes |
|---|---|---|---|
| 2 | 2 | Gabriel Winckler | |
| 3 | 2 | Gabriel Winckler | h2. Envio local, exemplos de scripts |
| 4 | 2 | Gabriel Winckler | |
| 5 | 2 | Gabriel Winckler | Informações sobre o uso direto do cluster local estão em [[SLURM|aqui]]. |
| 6 | 2 | Gabriel Winckler | |
| 7 | 2 | Gabriel Winckler | h3. Serial |
| 8 | 2 | Gabriel Winckler | |
| 9 | 2 | Gabriel Winckler | <pre> |
| 10 | 2 | Gabriel Winckler | #!/bin/bash |
| 11 | 2 | Gabriel Winckler | #SBATCH -t 3 |
| 12 | 2 | Gabriel Winckler | |
| 13 | 2 | Gabriel Winckler | module load mrbayes |
| 14 | 2 | Gabriel Winckler | goo-job-nanny mb mrbayes-serial.nex |
| 15 | 2 | Gabriel Winckler | </pre> |
| 16 | 2 | Gabriel Winckler | |
| 17 | 2 | Gabriel Winckler | h3. MPI |
| 18 | 2 | Gabriel Winckler | |
| 19 | 2 | Gabriel Winckler | <pre> |
| 20 | 2 | Gabriel Winckler | #!/bin/bash |
| 21 | 2 | Gabriel Winckler | #SBATCH -t 3 -n 16 |
| 22 | 2 | Gabriel Winckler | |
| 23 | 2 | Gabriel Winckler | module load mrbayes |
| 24 | 2 | Gabriel Winckler | goo-job-nanny srun -n 16 mb mrbayes-serial.nex |
| 25 | 2 | Gabriel Winckler | </pre> |
| 26 | 2 | Gabriel Winckler | |
| 27 | 2 | Gabriel Winckler | |
| 28 | 2 | Gabriel Winckler | h2. Submissão Simplificada |
| 29 | 2 | Gabriel Winckler | |
| 30 | 1 | Gabriel Winckler | {{include(SubmissaoSimplificadaCabecalho)}} |
| 31 | 1 | Gabriel Winckler | |
| 32 | 2 | Gabriel Winckler | |
| 33 | 1 | Gabriel Winckler | |
| 34 | 1 | Gabriel Winckler | Exemplo: |
| 35 | 1 | Gabriel Winckler | <pre> |
| 36 | 1 | Gabriel Winckler | APP=mrbayes |
| 37 | 1 | Gabriel Winckler | CASE=nome_do_caso |
| 38 | 1 | Gabriel Winckler | HOSTS=4 |
| 39 | 1 | Gabriel Winckler | </pre> |
| 40 | 1 | Gabriel Winckler | |
| 41 | 1 | Gabriel Winckler | Essa submissão espera o arquivo de entrada "nome_do_caso.nex". |
| 42 | 1 | Gabriel Winckler | |
| 43 | 1 | Gabriel Winckler | Caso OUTPUT não seja declarado, o sistema salvará os arquivos no padrão "nome_do_caso.nex.*" |
| 44 | 1 | Gabriel Winckler | |
| 45 | 1 | Gabriel Winckler | *Para rodar em modo serial, omita a linha HOSTS* |
| 46 | 1 | Gabriel Winckler | |
| 47 | 1 | Gabriel Winckler | {{include(SubmissaoSimplificadaRodape)}} |